BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G03LP1|AL430104
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig582 1802 0.0
>3x_Contig582
Length = 2827
Score = 1802 bits (907), Expect = 0.0
Identities = 931/937 (99%), Gaps = 3/937 (0%)
Strand = Plus / Minus
Query: 1 agatcaaagcgccgcttctaagttacaagatttatatcattaattactgttcattatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 agatcaaagcgccgcttctaagttacaagatttatatcattaattactgttcattatcta 1525
Query: 61 tatccttcttatggaggatacctgtaaaactgccaaaggactgatgtttattcgatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 tatccttcttatggaggatacctgtaaaactgccaaaggactgatgtttattcgatccag 1465
Query: 121 aagtcactttatttctgtttgagacagctttcggcgtctgaattccatttgacgaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 aagtcactttatttctgtttgagacagctttcggcgtctgaattccatttgacgaatttg 1405
Query: 181 aaagtggggagaattttgcaggtggagtagcagaccttgctatgtgagacagcggcgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 aaagtggggagaattttgcaggtggagtagcagaccttgctatgtgagacagcggcgtca 1345
Query: 241 tactaaacccaaaatgctttgatgcagtatttttcaatgcgctcgttgaagtcgatttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 tactaaacccaaaatgctttgatgcagtatttttcaatgcgctcgttgaagtcgatttcg 1285
Query: 301 caaggaaaggtcgtccagcgtgcttggttgtttgagaatcctctaattctctctcatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 caaggaaaggtcgtccagcgtgcttggttgtttgagaatcctctaattctctctcatggt 1225
Query: 361 gatctgcatacatgtgggtcaatgagtttgaagactgattacwttggttgawcaacatcg 420
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1224 gatctgcatacatgtgggtcaatgagtttgaagactgattactttggttgatcaacatcg 1165
Query: 421 atggtgagatttttgaatgtgcacagtggtgcatctctggctggcacctatgatgcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 atggtgagatttttgaatgtgcacagtggtgcatctctggctggcacctatgatgcaatt 1105
Query: 481 ctttgggtctttcaagagatcccacagaaaaggttgtgctaccaccatttagtgcatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ctttgggtctttcaagagatcccacagaaaaggttgtgctaccaccatttagtgcatccc 1045
Query: 541 cgtcactagggtacgctggtggcaattctcccatagtagatgcagttttcattgcattgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 cgtcactagggtacgctggtggcaattctcccatagtagatgcagttttcattgcattgt 985
Query: 601 cgtaaga-ggtactctgcttaaacwagatatttcccaatcattcctagaaggagatcccg 659
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 984 cgtaagacggtactctgcttaaactagatatttcccaatcattcctagaaggagatcccg 925
Query: 660 ccttgaattcaaacgaattcgctctggataagtaatcaaagccaggggagtccatctggg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ccttgaattcaaacgaattcgctctggataagtaatcaaagccaggggagtccatctggg 865
Query: 720 acggcgatcttaaatgtgacggcac-ttgagaacgctgtggttgttacgattcgaggagt 778
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 864 acggcgatcttaaatgtgacggcacgttgagaacgctgtggttgttacgattcgaggagt 805
Query: 779 tcagtgtaaaataatcgtttacccgtaactgagagggtacgtcttgcaatgaaagtggtg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tcagtgtaaaataatcgtttacccgtaactgagagggtacgtcttgcaatgaaagtggtg 745
Query: 839 tcgctaaagctgacctactaggaacttgtgtgtcaagattcaatccactaccatccgggc 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 744 tcgctaaagctgacctactaggaacttgtgtgtcaagattcaatccactaccatcc-ggc 686
Query: 899 tcttccatctcccgttcaagtctgagctgttggaggc 935
|||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcttccatctcccgttcaagtctgagctgttggaggc 649
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5240
Number of Sequences: 1807
Number of extensions: 5240
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)